sanger/Phylo Tree Viewer
Running DemoPhylogenetic tree visualization and comparison tool for evolutionary analysis.
An interactive phylogenetic tree viewer for exploring evolutionary relationships. Upload Newick or Nexus files, or connect to precomputed gene trees from Ensembl Compara to visualize and compare tree topologies.
Features
- Interactive tree rendering with radial, rectangular, and unrooted layouts
- Tanglegram view for comparing two tree topologies side-by-side
- Metadata overlay — color branches by taxonomy, geography, or custom annotations
- Subtree operations — collapse, reroot, rotate, and extract clades
Included datasets
Ships with example trees from the Sanger Institute’s global pathogen surveillance projects, including a 10,000-tip Mycobacterium tuberculosis phylogeny and a multi-locus Plasmodium species tree.
Contents
3 Notebooks
2 Datasets
1 Protocol